Property Detail

• java.lang.String experiment

• java.lang.String project

• java.lang.String space

Method Detail

• public ISampleBean copy()

• public java.lang.String getCode()

• public java.lang.String getExperiment()

• public java.util.Map<java.lang.String, java.lang.Object> getMetadata()

• public java.util.List<java.lang.String> getParentIDs()

• public java.lang.String getProject()

• public java.lang.String getSecondaryName()

• public java.lang.String getSpace()

• public SampleType getType()

• public java.util.List<java.lang.String> getUnknownMetadataValuesForVocabulary(java.lang.String propertyName, java.util.List<java.lang.String> vocabulary)

  Given a vocabulary of terms for a propertyName, find if property value(s) of this sample do fit the vocabulary and return all the unknown values in a list

  Parameters:

  propertyName - name under which the property using the provided vocabulary is stored, e.g. in the metadata property

  vocabulary - List of known vocabulary terms for a property

  Returns:

  List of terms that do not fit the vocabulary

• public boolean hasParents()

• public void replaceMetadataValues(java.lang.String propertyName, java.util.Map<java.lang.String, java.lang.String> oldToNewMetadata)

  replace metadata values relating to a certain property

  Parameters:

  propertyName - name under which the property is stored, e.g. in the metadata property

  oldToNewMetadata - map specifying a number of terms and the replacement terms, e.g. when replacing terms not fitting to a vocabulary after user input

• public void setExperiment(java.lang.String experiment)

• public void setProject(java.lang.String project)

• public void setSpace(java.lang.String space)