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QBiC Project Wizard enables users to create hierarchical experiments including different study
conditions using factorial design. Copyright (C) "2016" Andreas Friedrich
This program is free software: you can redistribute it and/or modify it under the terms of the
GNU General Public License as published by the Free Software Foundation, either version 3 of the
License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without
even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
General Public License for more details.
You should have received a copy of the GNU General Public License along with this program. If
not, see
Modifiers | Name | Description |
---|---|---|
private java.lang.String |
ncbiOrganism |
|
private java.lang.String |
speciesInfo |
Fields inherited from class | Fields |
---|---|
class AOpenbisSample |
Q_ADDITIONAL_NOTES, Q_EXTERNALDB_ID, Q_SECONDARY_NAME, code, experiment, factors, parent, parents, sampleType, space, tempID, tempParentIDs |
Constructor and description |
---|
OpenbisBiologicalEntity
(java.lang.String openbisName, java.lang.String space, java.lang.String experiment, java.lang.String secondaryName, java.lang.String additionalNotes, java.util.List<life.qbic.xml.properties.Property> factors, java.lang.String ncbiOrganism, java.lang.String speciesInfo, java.lang.String extID) Create a new Biological Entity |
Type Params | Return Type | Name and description |
---|---|---|
|
java.util.Map<java.lang.String, java.lang.String> |
getValueMap() |
Methods inherited from class | Name |
---|---|
class AOpenbisSample |
addFactor, fillInFactors, getCode, getFactorLabels, getFactorStrings, getFactorStringsWithoutLabel, getFactors, getParent, getParents, getQ_ADDITIONAL_NOTES, getQ_EXTERNALDB_ID, getQ_SECONDARY_NAME, getSpace, getTempID, getTempParentIDs, getValueMap, setCode, setExperiment, setFactors, setParent, setQ_ADDITIONAL_NOTES, setQ_EXTERNALDB_ID, setQ_SECONDARY_NAME, setSampleType, setSpace, toString |
Create a new Biological Entity
openbisName
- Code of the sampleexperiment
- Experiment the sample is attached tosecondaryName
- Secondary name of the sample (e.g. humanly readable identifier)additionalNotes
- Free text notes for the samplefactors
- A list of conditions of this samplencbiOrganism
- The organism the entity belongs tospecisInfo
- More information about the speciesextID
- External database identifier